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Entry details : L44601


GENERAL INFORMATION
ID L44601; SV 1; linear; mRNA; STD; VRL; 340 BP.
Primary AC L44601
Creation Date 22-NOV-1995 (Rel. 45, Created)
Update Date 23-JAN-2011 (Rel. 122, Last updated , Version 0)
Description Hepatitis C virus partial genome, no 5'UTR, partial CDS (Contains: NS5B), no 3'UTR.
Genotype
Deposited 2
Provisional 2p
Confirmed n.a.
Isolate nl33
Keywords partial genome;  partial CDS;  NS5B; 
Organism
OS Hepatitis C virus genotype 2
OC Viruses;  ssRNA positive-strand viruses, no DNA stage;  Flaviviridae;  Hepacivirus; 
REFERENCES
[1]
1 - 340
RA Stuyver L.;  Wyseur A.;  van Arnhem W.;  Lunel F.;  Laurent-Puig P.;  Pawlotsky J.-M.;  Kleter B.;  Bassit L.;  Nkengasong J.;  van Doorn L.-J.;  Maertens G.; 
RT Hepatitis C virus genotyping by means of 5'-UR/core line probe assays and molecular analysis of untypeable samples
RL Virus Res. 38(2-3):137-157(1995).
RX DOI: 10.1016/0168-1702(95)00052-R  
PUBMED: 8578855  
FEATURES
source
1..340
(340)
db_xref taxon : 40271
db_xref EMBL : L44601
db_xref euHCVdb : AB047639
mol_type mRNA
organism Hepatitis C virus genotype 2
misc_feature
1..340
(340)
note NS5B genotyping region
gene
<1..>340
(340)
locus_tag HCVORF1
CDS
<1..>340
(340)
codon_start offset : 2
locus_tag HCVORF1
product Partial HCV polyprotein (contains NS5B).
translation VIEW
mat_peptide
<1..>340
(340)

NS5B
function NS5B protein coding sequence (ns5b sequence)
locus_tag HCVORF1
product NS5B protein. Produced by proteolytic processing by the HCV NS3 protease. NS5B is a RNA-dependent RNA polymerase that plays an essential role in virus replication
prod_ft
chain 1..113  (113) RNA-dependent RNA polymerase (NS5B protein) (P68)
standard_name NS5B
SEQUENCES
Sequence VIEW
Translation(s)
locus_tag HCVORF1 VIEW

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