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Entry details : DQ106415


GENERAL INFORMATION
ID DQ106415; SV 1; linear; genomic RNA; STD; VRL; 182 BP.
Primary AC DQ106415
Creation Date 26-JUL-2005 (Rel. 84, Created)
Update Date 23-JAN-2011 (Rel. 122, Last updated , Version 0)
Description Hepatitis C virus partial genome, partial 5'UTR, no CDS, no 3'UTR.
Genotype
Deposited 1
Provisional n.a.
Confirmed n.a.
Isolate 71221
Keywords partial genome;  partial 5'UTR; 
Organism
OS Hepatitis C virus
OC Viruses;  ssRNA positive-strand viruses, no DNA stage;  Flaviviridae;  Hepacivirus; 
REFERENCES
[1]
1 - 182
RA Munoz M.G.;  Venegas M.E.;  Acevedo W.M.;  Paredes A.H.;  Brahm J.R.; 
RT Human hepatitis C virus subtype 1a genomic RNA, 5' noncoding region from three chilean patients
RL Unpublished.
[2]
1 - 182
RA Munoz M.G.;  Venegas M.E.;  Acevedo W.M.;  Paredes A.H.;  Brahm J.R.; 
RL Submitted (24-JUN-2005) to the EMBL/GenBank/DDBJ databases. Gastroenterology Laboratory, Clinical Hospital University of Chile, Santos Dumont # 999, Santiago, RM, Chile
FEATURES
source
1..182
(182)
country country : Chile
sub-region :
db_xref taxon : 11103
db_xref EMBL : DQ106415
db_xref euHCVdb : AF009606
host Homo sapiens
isolation_source serum
mol_type genomic RNA
organism Hepatitis C virus
5'UTR
<1..>182
(182)

5UTR
function 5'UTR highly conserved genomic region (contains four structural domains (I to IV), domains II to IV make up the internal ribosome entry site (IRES))
standard_name 5UTR
RBS
<1..>182
(182)

IRES
function The internal ribosome entry site (IRES) is made up by domains II to IV of the 5'UTR
standard_name IRES
stem_loop
<1..23
(23)

5UTR-dII
function 5'UTR domain II is a component of the IRES
standard_name 5UTR-dII
stem_loop
30..>182
(153)

5UTR-dIII
function 5'UTR domain III is a component of the IRES
standard_name 5UTR-dIII
SEQUENCES
Sequence VIEW

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